DisGeNET - a database of gene-disease associations

List of shared variants

Depressive disorder, C0011581

Disease: Mental Depression

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs797045032	CLCN1	0.827	0.280	7	143321720	missense variant	GG/TC	mnv			11
rs1799752	ACE	0.677	0.480	17	63488529	intron variant	-/TTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCATACAGTCACTTTT	delins			25
rs528732638	CHST9 ; AQP4-AS1	0.851	0.120	18	26940224	intron variant	A/-;AA;AAA;AAAA	delins			5
rs57875989	PER3	0.882	0.080	1	7829913	splice acceptor variant	GCTCTGTCCACAGGATCGCCTCCCATGAAGAATCCATCCCATCCTACTGCCAGC/-;GCTCTGTCCACAGGATCGCCTCCCATGAAGAATCCATCCCATCCTACTGCCAGCGCTCTGTCCACAGGATCGCCTCCCATGAAGAATCCATCCCATCCTACTGCCAGC	delins	0.11	0.18	7
rs765798193	PSMD9	0.732	0.320	12	121915884	frameshift variant	G/-;GG	delins			18
rs1006737	CACNA1C	0.695	0.120	12	2236129	intron variant	G/A	snv		0.36	27
rs1013940	SLC5A7	0.827	0.160	2	107992192	missense variant	A/G	snv	9.3E-02	7.4E-02	6
rs10223646	DSE	0.882	0.080	6	116296236	intron variant	C/T	snv		0.41	4
rs1033656351	P2RX4	0.827	0.160	12	121232997	missense variant	G/A	snv	1.6E-05	2.8E-05	7
rs10410544	SIRT2	0.827	0.120	19	38894892	intron variant	T/C	snv	0.68	0.67	6
rs1042173	SLC6A4	0.763	0.320	17	30197993	3 prime UTR variant	A/C	snv		0.40	14
rs1043307	PSMD9	0.776	0.360	12	121915890	missense variant	A/C;G	snv			14
rs10434	VEGFA	0.701	0.480	6	43785475	3 prime UTR variant	A/G	snv		0.59	17
rs1044396	CHRNA4	0.742	0.240	20	63349782	missense variant	G/A;C	snv	0.47; 6.1E-05		17
rs1044397	CHRNA4	0.851	0.160	20	63349752	synonymous variant	C/T	snv	0.48	0.41	7
rs1045642	ABCB1	0.456	0.840	7	87509329	synonymous variant	A/G;T	snv	0.50		214
rs1049353	CNR1	0.630	0.600	6	88143916	synonymous variant	C/T	snv	0.21	0.20	42
rs10510057		0.925	0.080	10	119551536	intergenic variant	G/C	snv		0.22	3
rs10514299	TMEM161B-AS1	0.827	0.120	5	88367793	intron variant	C/T	snv		0.21	6
rs1051730	CHRNA3	0.641	0.600	15	78601997	synonymous variant	G/A	snv	0.27	0.26	43
rs1061622	TNFRSF1B	0.633	0.760	1	12192898	missense variant	T/G	snv	0.22	0.22	33
rs10766075	ARNTL	0.925	0.080	11	13297040	intron variant	C/T	snv		0.27	6
rs1082214	MIP	0.925	0.080	12	56452706	non coding transcript exon variant	C/T	snv		9.3E-02	6
rs10830963	MTNR1B	0.776	0.400	11	92975544	intron variant	C/G	snv		0.22	27
rs10848635	CACNA1C	0.882	0.080	12	2207029	intron variant	T/A;C	snv		0.34	4